Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AL139415.2-201ENST00000431968 163 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 XKRYP2-201ENST00000432915 492 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 RSU1P2-202ENST00000437884 485 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AL117351.1-201ENST00000438864 766 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 MTCO1P53-201ENST00000441633 699 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 FAM103A2P-201ENST00000444122 354 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC008549.1-201ENST00000512900 643 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 RNA5SP137-201ENST00000516833 135 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC079598.5-201ENST00000547460 117 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 MIR4782-201ENST00000577987 79 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AL136981.2-201ENST00000617319 734 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 MIR6134-201ENST00000617606 109 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 CDC27P3-201ENST00000635418 1910 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 RNU6-701P-201ENST00000384059 107 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 RNU6-278P-201ENST00000390945 109 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 UBE2V1P2-201ENST00000397758 440 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL136310.1-201ENST00000404926 654 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC078974.1-201ENST00000411597 223 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL353621.1-201ENST00000418219 243 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL592045.1-201ENST00000429867 352 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL353689.1-201ENST00000438895 199 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 MTND4P25-201ENST00000441039 533 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 USP9YP15-201ENST00000442391 422 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL353705.4-201ENST00000449661 238 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 RPL23AP3-201ENST00000453844 468 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC116353.3-201ENST00000511215 249 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 RNU6-678P-201ENST00000516832 109 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 MIR4299-201ENST00000577899 72 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC068790.3-201ENST00000602988 553 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AL596327.1-201ENST00000603629 213 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC090970.3-201ENST00000612566 866 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC005296.1-201ENST00000616145 209 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC013470.4-201ENST00000619978 986 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC138627.2-201ENST00000624202 601 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 AC103710.2-202ENST00000641454 2853 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.7□□□□□ -2.14
VAPAQ9P0L0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AP006437.1-201ENST00000641440 3685 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RNU6-1284P-201ENST00000363701 100 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 SNORA25B-201ENST00000365507 128 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RNU6-898P-201ENST00000365627 104 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RNU6-1257P-201ENST00000384625 110 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AL079342.1-201ENST00000401460 267 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 VN1R51P-201ENST00000411675 945 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RPL7P34-201ENST00000433316 712 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 DNAJC19P4-201ENST00000440115 345 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 BRK1P2-201ENST00000442875 223 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC055855.1-201ENST00000489563 579 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC023194.1-201ENST00000493084 308 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC104629.1-201ENST00000494226 508 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 HMGB1P35-201ENST00000503360 598 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC107393.1-201ENST00000512403 346 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RNU6-143P-201ENST00000516942 93 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 SNORA31.23-201ENST00000517219 133 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC091163.3-201ENST00000518269 1144 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AP006587.4-201ENST00000526053 529 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RANP3-201ENST00000530970 276 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms