Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 RPL30P15-201ENST00000457129 321 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 Y_RNA.631-201ENST00000459607 101 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 RPL21P11-201ENST00000461458 483 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC130509.1-201ENST00000464158 433 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 HMGN1P10-201ENST00000474557 553 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC008716.1-201ENST00000511084 513 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 RAC1P2-201ENST00000511164 579 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 RNA5SP208-201ENST00000516156 78 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC069113.1-201ENST00000517763 267 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 TRMT10BP1-201ENST00000519377 943 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC004024.1-201ENST00000549244 247 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AL606490.9-201ENST00000603331 271 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 SNRPGP17-201ENST00000603780 214 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC069200.1-201ENST00000609511 323 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 AC090132.2-201ENST00000615881 347 ntBASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
AMBRA1Q9C0C7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.53□□□□□ -1.85
AMBRA1Q9C0C7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AL353621.1-201ENST00000418219 243 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AL590632.1-201ENST00000424289 371 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 RPL7P37-201ENST00000425095 738 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 Z82205.1-201ENST00000428456 297 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 SNORA71B-202ENST00000439232 272 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 ELOCP24-201ENST00000456370 334 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 RNU7-138P-201ENST00000459479 64 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 PPIAP15-201ENST00000479662 484 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 RPL31P13-201ENST00000484151 370 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC022493.1-201ENST00000492984 337 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC026801.1-201ENST00000497178 464 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 SNORA70.24-201ENST00000517233 118 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC025423.5-201ENST00000550230 219 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC006270.2-201ENST00000578523 652 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 SRGNP1-201ENST00000603392 451 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AL157817.1-201ENST00000614264 790 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AL391261.4-201ENST00000616012 481 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 AC098657.3-201ENST00000620434 263 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 CEP170P1-201ENST00000502249 4587 ntBASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
AMBRA1Q9C0C7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC138393.1-203ENST00000327086 343 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.202-201ENST00000364083 110 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.395-201ENST00000383945 109 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-95P-201ENST00000384697 107 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 CYCSP33-201ENST00000414485 327 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC245054.2-201ENST00000415639 319 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 GPM6BP2-201ENST00000432046 144 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 GOT2P5-201ENST00000433995 546 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 GPM6BP1-201ENST00000446387 144 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC090096.1-201ENST00000489168 390 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC026784.1-201ENST00000507986 352 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC116337.1-201ENST00000509680 687 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC096745.1-201ENST00000509945 370 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC005921.1-201ENST00000510589 286 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC092436.3-201ENST00000511788 257 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 ELOCP31-201ENST00000540463 467 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AL157871.3-201ENST00000557231 293 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 MIR4644-201ENST00000579929 84 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.51□□□□□ -1.85
AMBRA1Q9C0C7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms