Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC087854.1-201ENST00000519706 414 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AMZ2P1-203ENST00000565833 850 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 RPS3AP23-202ENST00000574601 686 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC006077.1-201ENST00000604746 343 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC087045.1-201ENST00000605856 382 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 uc_338.15-201ENST00000615470 191 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 MIR8058-201ENST00000615737 89 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC073308.1-201ENST00000623696 305 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 U6.99-201ENST00000637524 83 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC005183.1-201ENST00000603687 1979 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RNA5SP295-201ENST00000362655 121 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 SNORD3E-201ENST00000362899 217 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.184-201ENST00000363884 108 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RNU6-128P-201ENST00000383976 107 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 SNORA57.1-201ENST00000391227 145 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 SNORA40C-201ENST00000391285 128 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 SNORA48.7-201ENST00000391302 135 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RNU2-3P-201ENST00000410144 191 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 VN1R36P-201ENST00000414936 291 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AL139396.1-201ENST00000421137 167 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AL627311.1-201ENST00000431514 115 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RPL37P4-201ENST00000448908 268 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AC011005.2-201ENST00000487324 359 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 FGF7P4-201ENST00000509595 295 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RNU6-579P-201ENST00000516879 102 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 SNORA25.17-201ENST00000517184 124 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 C8orf59P2-201ENST00000603441 271 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AL645944.1-201ENST00000603857 493 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 NUTF2P8-201ENST00000604593 363 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AC007938.3-201ENST00000604965 623 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RNU1-30P-201ENST00000606575 163 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AL132765.2-201ENST00000610812 351 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AC009233.1-201ENST00000616477 371 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AL359697.1-201ENST00000624879 587 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 AC112487.2-201ENST00000637950 304 ntBASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TRIM54Q9BYV2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 FRG1CP-201ENST00000358464 769 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RNU4-73P-201ENST00000363164 141 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.301-201ENST00000364990 103 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.324-201ENST00000365165 102 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 MIR34A-201ENST00000385130 110 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 MIR888-201ENST00000401186 77 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AL445189.1-201ENST00000405722 338 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RPL26P27-201ENST00000414397 437 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 CYCSP33-201ENST00000414485 327 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AC007389.2-201ENST00000434630 306 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AMD1P1-201ENST00000457220 922 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RNU7-138P-201ENST00000459479 64 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RPL21P129-201ENST00000491732 478 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RPL39P5-202ENST00000512505 151 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RNU1-86P-201ENST00000516108 154 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.675-201ENST00000516389 149 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.691-201ENST00000516611 103 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RNU1-107P-201ENST00000516617 154 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 RNU6-928P-201ENST00000516876 104 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 MIR4782-201ENST00000577987 79 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AP003355.3-201ENST00000623465 114 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AC058791.1-201ENST00000608412 3198 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 AC007656.2-201ENST00000624902 4547 ntBASIC3.54□□□□□ -1.84
TRIM54Q9BYV2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 SNORD14B-201ENST00000364533 90 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RNA5SP479-201ENST00000364858 117 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RNU6-214P-201ENST00000384130 107 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 MIR23B-201ENST00000384832 97 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 MIR10A-201ENST00000385043 110 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RPS15AP6-201ENST00000420703 385 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms