Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.31□□□□□ -2.2
RTL9Q8NET4 AC004067.1-201ENST00000608733 700 ntBASIC1.31□□□□□ -2.2
RTL9Q8NET4 FTX_3.1-201ENST00000610451 147 ntBASIC1.31□□□□□ -2.2
RTL9Q8NET4 U4atac.1-201ENST00000618345 95 ntBASIC1.31□□□□□ -2.2
RTL9Q8NET4 AC097655.1-201ENST00000635075 318 ntBASIC1.31□□□□□ -2.2
RTL9Q8NET4 LINC02211-204ENST00000642024 1070 ntBASIC1.31□□□□□ -2.2
RTL9Q8NET4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RTL9Q8NET4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RTL9Q8NET4 RNU6-619P-201ENST00000365146 108 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.3□□□□□ -2.2
RTL9Q8NET4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.3□□□□□ -2.2
RTL9Q8NET4 AC048346.1-201ENST00000510247 144 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 AC093752.1-206ENST00000511823 336 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 HSPA8P13-201ENST00000523715 472 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.3□□□□□ -2.2
RTL9Q8NET4 AC105245.1-201ENST00000581934 244 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.3□□□□□ -2.2
RTL9Q8NET4 AL355802.4-201ENST00000607635 548 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 AC104763.3-201ENST00000613765 618 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 AL163051.2-201ENST00000618976 735 ntBASIC1.3□□□□□ -2.2
RTL9Q8NET4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.3□□□□□ -2.2
RTL9Q8NET4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RTL9Q8NET4 RNA5SP325-201ENST00000363756 130 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 MIR888-201ENST00000401186 77 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 TMSB4XP8-201ENST00000402089 135 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AL356421.1-201ENST00000403255 413 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AL139098.1-201ENST00000407291 389 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 U6atac.2-201ENST00000408644 118 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 TMSB4XP6-201ENST00000415187 135 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 CCDC58P2-201ENST00000417131 366 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 TMSB4XP1-201ENST00000424567 135 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 AC007919.1-201ENST00000429380 217 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 AL050341.1-201ENST00000447743 313 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 SNORA31.16-201ENST00000516773 139 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 RNA5SP291-201ENST00000517222 105 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 NIFKP8-201ENST00000560500 874 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AC093519.1-201ENST00000566109 298 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 MIR5000-201ENST00000577717 103 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 MIR4765-201ENST00000585007 77 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 AP001033.2-201ENST00000609701 1003 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AC092140.2-201ENST00000618027 521 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.29□□□□□ -2.2
RTL9Q8NET4 MTND5P30-201ENST00000452896 1731 ntBASIC1.29□□□□□ -2.2
RTL9Q8NET4 MFSD8-213ENST00000641134 1327 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 SNORA62.1-201ENST00000364287 154 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 RNU4-38P-201ENST00000364472 129 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 SNORD116-23-201ENST00000384645 92 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 RNA5SP212-201ENST00000391223 107 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 AC241584.1-201ENST00000438469 1241 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RTL9Q8NET4 LTV1P1-201ENST00000510683 1237 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 AP004247.1-201ENST00000531556 1289 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RTL9Q8NET4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 AL078605.1-201ENST00000603529 500 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 AC123912.5-201ENST00000605470 343 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 SNORD114-21-201ENST00000606412 72 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 AP000238.1-201ENST00000608759 426 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 AC008443.7-201ENST00000622195 246 ntBASIC1.28□□□□□ -2.2
RTL9Q8NET4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.28□□□□□ -2.2
RTL9Q8NET4 RNA5SP465-201ENST00000391195 109 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 AC007742.1-201ENST00000425789 329 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 AC008850.1-201ENST00000427546 362 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.27□□□□□ -2.21
RTL9Q8NET4 ELOCP26-201ENST00000436067 329 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 GDI2P2-201ENST00000445131 608 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.27□□□□□ -2.21
RTL9Q8NET4 COX6CP18-201ENST00000448769 222 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
RTL9Q8NET4 AL353691.1-201ENST00000451332 387 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 FAM206BP-201ENST00000510179 541 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.27□□□□□ -2.21
RTL9Q8NET4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.27□□□□□ -2.21
RTL9Q8NET4 MIR3973-201ENST00000579824 107 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 VN1R107P-201ENST00000601784 209 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 AL050343.2-201ENST00000607338 280 ntBASIC1.27□□□□□ -2.21
RTL9Q8NET4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.27□□□□□ -2.21
RTL9Q8NET4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.26□□□□□ -2.21
RTL9Q8NET4 SNORD51.1-201ENST00000365405 77 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 AL109755.1-201ENST00000401791 649 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.26□□□□□ -2.21
RTL9Q8NET4 UBE2FP1-201ENST00000416536 447 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 BPY2DP-201ENST00000422208 265 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 FABP5P14-201ENST00000437273 393 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.26□□□□□ -2.21
RTL9Q8NET4 MTND2P6-201ENST00000455337 1030 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 AC108059.3-201ENST00000456388 214 ntBASIC1.26□□□□□ -2.21
RTL9Q8NET4 SNRPFP3-201ENST00000457792 225 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms