Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU5A-8P-201ENST00000364102 114 ntBASIC1.97□□□□□ -2.09
VSX2P58304 SNORA3A-201ENST00000364113 130 ntBASIC1.97□□□□□ -2.09
VSX2P58304 Y_RNA.302-201ENST00000364997 102 ntBASIC1.97□□□□□ -2.09
VSX2P58304 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
VSX2P58304 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
VSX2P58304 Z98749.2-208ENST00000381646 500 ntBASIC1.97□□□□□ -2.09
VSX2P58304 RNU6-658P-201ENST00000384606 106 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AL079342.1-201ENST00000401460 267 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
VSX2P58304 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC104651.1-201ENST00000427559 735 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 AC004383.1-201ENST00000438135 289 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 AC022493.1-201ENST00000492984 337 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.97□□□□□ -2.09
VSX2P58304 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 RNU6-581P-201ENST00000516214 105 ntBASIC1.97□□□□□ -2.09
VSX2P58304 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.97□□□□□ -2.09
VSX2P58304 AC006199.1-201ENST00000548728 219 ntBASIC1.97□□□□□ -2.09
VSX2P58304 ARL2BPP2-201ENST00000550907 489 ntBASIC1.97□□□□□ -2.09
VSX2P58304 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC011458.1-201ENST00000604034 617 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC091152.3-201ENST00000604227 325 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AP000860.1-201ENST00000605250 559 ntBASIC1.97□□□□□ -2.09
VSX2P58304 SNORD14A-201ENST00000606526 91 ntBASIC1.97□□□□□ -2.09
VSX2P58304 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.97□□□□□ -2.09
VSX2P58304 AC103710.1-201ENST00000610003 901 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC005332.10-201ENST00000612725 619 ntBASIC1.97□□□□□ -2.09
VSX2P58304 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.97□□□□□ -2.09
VSX2P58304 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
VSX2P58304 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
VSX2P58304 AL109809.4-201ENST00000603520 2185 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
VSX2P58304 OR56A5-201ENST00000340110 738 ntBASIC1.96□□□□□ -2.1
VSX2P58304 RNU6-1284P-201ENST00000363701 100 ntBASIC1.96□□□□□ -2.1
VSX2P58304 RNY3P13-201ENST00000365542 102 ntBASIC1.96□□□□□ -2.1
VSX2P58304 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VSX2P58304 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.96□□□□□ -2.1
VSX2P58304 AL021407.1-201ENST00000404531 386 ntBASIC1.96□□□□□ -2.1
VSX2P58304 SNORD23.1-201ENST00000408212 104 ntBASIC1.96□□□□□ -2.1
VSX2P58304 RNU2-36P-201ENST00000410361 191 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC096649.2-201ENST00000416186 393 ntBASIC1.96□□□□□ -2.1
VSX2P58304 ZNF90P2-204ENST00000419323 1075 ntBASIC1.96□□□□□ -2.1
VSX2P58304 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.96□□□□□ -2.1
VSX2P58304 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.96□□□□□ -2.1
VSX2P58304 AL022400.1-201ENST00000423946 935 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AL592045.1-201ENST00000429867 352 ntBASIC1.96□□□□□ -2.1
VSX2P58304 HMGN2P3-201ENST00000433603 273 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.96□□□□□ -2.1
VSX2P58304 HMGN2P5-201ENST00000436882 273 ntBASIC1.96□□□□□ -2.1
VSX2P58304 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VSX2P58304 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.96□□□□□ -2.1
VSX2P58304 AL591719.1-201ENST00000444669 744 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.96□□□□□ -2.1
VSX2P58304 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VSX2P58304 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.96□□□□□ -2.1
VSX2P58304 RPL38P4-201ENST00000502376 214 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC020699.1-201ENST00000505161 445 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.96□□□□□ -2.1
VSX2P58304 RNU6-237P-201ENST00000515985 71 ntBASIC1.96□□□□□ -2.1
VSX2P58304 RNU6-311P-201ENST00000516224 102 ntBASIC1.96□□□□□ -2.1
VSX2P58304 SCARNA1-201ENST00000517138 166 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.96□□□□□ -2.1
VSX2P58304 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.96□□□□□ -2.1
VSX2P58304 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VSX2P58304 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VSX2P58304 MIR3146-201ENST00000580367 79 ntBASIC1.96□□□□□ -2.1
VSX2P58304 MIR3199-1-201ENST00000582434 88 ntBASIC1.96□□□□□ -2.1
VSX2P58304 NRBF2P1-201ENST00000587407 859 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AL358072.1-201ENST00000604156 575 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC135507.1-201ENST00000607214 561 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AL031667.3-201ENST00000620124 655 ntBASIC1.96□□□□□ -2.1
VSX2P58304 PISRT1-201ENST00000626175 531 ntBASIC1.96□□□□□ -2.1
VSX2P58304 AC092192.1-201ENST00000633154 1018 ntBASIC1.96□□□□□ -2.1
VSX2P58304 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
VSX2P58304 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
VSX2P58304 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.96□□□□□ -2.1
VSX2P58304 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
VSX2P58304 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VSX2P58304 GSTA9P-201ENST00000406231 611 ntBASIC1.95□□□□□ -2.1
VSX2P58304 FCF1P10-201ENST00000407590 479 ntBASIC1.95□□□□□ -2.1
VSX2P58304 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.95□□□□□ -2.1
VSX2P58304 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
VSX2P58304 RPL26P27-201ENST00000414397 437 ntBASIC1.95□□□□□ -2.1
VSX2P58304 OR51A5P-201ENST00000415429 942 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC027124.2-201ENST00000428249 105 ntBASIC1.95□□□□□ -2.1
VSX2P58304 HMGB1P9-201ENST00000429856 646 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.95□□□□□ -2.1
VSX2P58304 GPM6BP3-201ENST00000442797 145 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.95□□□□□ -2.1
VSX2P58304 AL606662.1-201ENST00000445763 553 ntBASIC1.95□□□□□ -2.1
VSX2P58304 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.95□□□□□ -2.1
VSX2P58304 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms