Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 GDI2P2-201ENST00000445131 608 ntBASIC1.09□□□□□ -2.23
SDC4P31431 COX6CP18-201ENST00000448769 222 ntBASIC1.09□□□□□ -2.23
SDC4P31431 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
SDC4P31431 AC048346.1-201ENST00000510247 144 ntBASIC1.09□□□□□ -2.23
SDC4P31431 SMURF2P1-201ENST00000514992 481 ntBASIC1.09□□□□□ -2.23
SDC4P31431 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.09□□□□□ -2.23
SDC4P31431 AC098848.2-201ENST00000588023 330 ntBASIC1.09□□□□□ -2.23
SDC4P31431 AP001542.2-201ENST00000593141 364 ntBASIC1.09□□□□□ -2.23
SDC4P31431 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.09□□□□□ -2.23
SDC4P31431 SNRPGP17-201ENST00000603780 214 ntBASIC1.09□□□□□ -2.23
SDC4P31431 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
SDC4P31431 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.09□□□□□ -2.23
SDC4P31431 AC104820.1-201ENST00000624183 307 ntBASIC1.09□□□□□ -2.23
SDC4P31431 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
SDC4P31431 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SDC4P31431 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SDC4P31431 RNU6-778P-201ENST00000363269 103 ntBASIC1.08□□□□□ -2.24
SDC4P31431 Y_RNA.338-201ENST00000365320 114 ntBASIC1.08□□□□□ -2.24
SDC4P31431 RNU6-1005P-201ENST00000384519 107 ntBASIC1.08□□□□□ -2.24
SDC4P31431 CCNG1P1-201ENST00000406783 885 ntBASIC1.08□□□□□ -2.24
SDC4P31431 RPL26P27-201ENST00000414397 437 ntBASIC1.08□□□□□ -2.24
SDC4P31431 RPS15AP12-201ENST00000419498 388 ntBASIC1.08□□□□□ -2.24
SDC4P31431 SKA2P1-201ENST00000425592 390 ntBASIC1.08□□□□□ -2.24
SDC4P31431 RPL7P34-201ENST00000433316 712 ntBASIC1.08□□□□□ -2.24
SDC4P31431 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.08□□□□□ -2.24
SDC4P31431 AL137159.1-201ENST00000452808 512 ntBASIC1.08□□□□□ -2.24
SDC4P31431 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.08□□□□□ -2.24
SDC4P31431 AC112492.4-201ENST00000456549 352 ntBASIC1.08□□□□□ -2.24
SDC4P31431 AC018868.1-201ENST00000491307 315 ntBASIC1.08□□□□□ -2.24
SDC4P31431 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.08□□□□□ -2.24
SDC4P31431 MTCO3P42-201ENST00000509488 518 ntBASIC1.08□□□□□ -2.24
SDC4P31431 MTCO3P39-201ENST00000514812 518 ntBASIC1.08□□□□□ -2.24
SDC4P31431 RNA5SP135-201ENST00000517019 125 ntBASIC1.08□□□□□ -2.24
SDC4P31431 NRON-201ENST00000517270 370 ntBASIC1.08□□□□□ -2.24
SDC4P31431 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.08□□□□□ -2.24
SDC4P31431 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.08□□□□□ -2.24
SDC4P31431 AC023824.3-201ENST00000569003 562 ntBASIC1.08□□□□□ -2.24
SDC4P31431 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
SDC4P31431 AC080078.3-201ENST00000605407 463 ntBASIC1.08□□□□□ -2.24
SDC4P31431 U1.36-201ENST00000620684 176 ntBASIC1.08□□□□□ -2.24
SDC4P31431 AL589994.2-201ENST00000621124 579 ntBASIC1.08□□□□□ -2.24
SDC4P31431 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
SDC4P31431 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SDC4P31431 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SDC4P31431 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SDC4P31431 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SDC4P31431 MIR29C-201ENST00000385231 88 ntBASIC1.07□□□□□ -2.24
SDC4P31431 TXNP7-201ENST00000406296 293 ntBASIC1.07□□□□□ -2.24
SDC4P31431 MIR1283-2-201ENST00000408621 87 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.07□□□□□ -2.24
SDC4P31431 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.07□□□□□ -2.24
SDC4P31431 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.07□□□□□ -2.24
SDC4P31431 AC079448.1-201ENST00000449377 373 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.07□□□□□ -2.24
SDC4P31431 AL590365.1-201ENST00000450788 243 ntBASIC1.07□□□□□ -2.24
SDC4P31431 KATNBL1P6-201ENST00000453433 915 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.07□□□□□ -2.24
SDC4P31431 AP001324.2-201ENST00000461163 319 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AC099513.1-201ENST00000490423 301 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.07□□□□□ -2.24
SDC4P31431 AP003497.1-201ENST00000528472 562 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AC021739.1-201ENST00000559631 174 ntBASIC1.07□□□□□ -2.24
SDC4P31431 BNIP3P24-201ENST00000593398 557 ntBASIC1.07□□□□□ -2.24
SDC4P31431 BNIP3P23-201ENST00000599655 511 ntBASIC1.07□□□□□ -2.24
SDC4P31431 AC004853.1-201ENST00000604902 698 ntBASIC1.07□□□□□ -2.24
SDC4P31431 DUSP12P1-201ENST00000612874 516 ntBASIC1.07□□□□□ -2.24
SDC4P31431 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
SDC4P31431 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.07□□□□□ -2.24
SDC4P31431 Z75746.1-201ENST00000440243 2080 ntBASIC1.06□□□□□ -2.24
SDC4P31431 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SDC4P31431 SNORD115-48-201ENST00000364764 76 ntBASIC1.06□□□□□ -2.24
SDC4P31431 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SDC4P31431 RNU6-321P-201ENST00000410912 106 ntBASIC1.06□□□□□ -2.24
SDC4P31431 MTCYBP38-201ENST00000417160 1123 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC097463.2-201ENST00000421074 142 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AL590233.1-201ENST00000430017 456 ntBASIC1.06□□□□□ -2.24
SDC4P31431 SNRPEP9-201ENST00000436794 238 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC002542.1-201ENST00000440683 193 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AL161651.1-201ENST00000440882 223 ntBASIC1.06□□□□□ -2.24
SDC4P31431 CR769776.1-201ENST00000441254 787 ntBASIC1.06□□□□□ -2.24
SDC4P31431 MOB1AP2-201ENST00000446060 614 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.06□□□□□ -2.24
SDC4P31431 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.06□□□□□ -2.24
SDC4P31431 AC244505.3-201ENST00000454598 187 ntBASIC1.06□□□□□ -2.24
SDC4P31431 COX6CP14-201ENST00000469580 174 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC005840.1-201ENST00000498412 377 ntBASIC1.06□□□□□ -2.24
SDC4P31431 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
SDC4P31431 AC108078.2-201ENST00000510750 236 ntBASIC1.06□□□□□ -2.24
SDC4P31431 TRMT112P2-201ENST00000512910 132 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC019288.1-201ENST00000557918 224 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.06□□□□□ -2.24
SDC4P31431 MIR4422-201ENST00000581938 83 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AL357094.1-201ENST00000603845 844 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC016727.1-205ENST00000605437 569 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AC092953.2-201ENST00000608000 699 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AF129408.1-201ENST00000608767 431 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AP001033.2-201ENST00000609701 1003 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AP005229.2-201ENST00000609980 697 ntBASIC1.06□□□□□ -2.24
SDC4P31431 AL359314.1-201ENST00000616913 261 ntBASIC1.06□□□□□ -2.24
SDC4P31431 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms