Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-1074P-201ENST00000383995 104 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 Y_RNA.473-201ENST00000384333 102 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 SNORD70.1-201ENST00000391007 85 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 RNU6-882P-201ENST00000391025 103 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AL356968.1-201ENST00000416622 474 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 ARL5AP1-201ENST00000418991 388 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 PPP1R11P2-201ENST00000423543 382 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 RPL21P112-201ENST00000434403 463 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 RPL36AP6-201ENST00000435770 321 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 FABP5P14-201ENST00000437273 393 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 RPL30P15-201ENST00000457129 321 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 RPS4XP2-201ENST00000458402 793 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 RNU7-152P-201ENST00000458982 64 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC104472.2-201ENST00000469035 601 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 RN7SL432P-201ENST00000484057 298 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 AP001086.1-201ENST00000494882 321 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 RPS27P27-201ENST00000498779 255 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 RNU6-1137P-201ENST00000517073 99 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC100870.1-201ENST00000522035 505 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC135001.1-201ENST00000544546 283 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC138761.3-201ENST00000579993 334 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 uc_338.1-201ENST00000612113 180 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AC012409.4-201ENST00000612923 249 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 uc_338.11-201ENST00000619132 160 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DOAP06340 uc_338.22-201ENST00000622722 187 ntBASIC3.88□□□□□ -1.79
HLA-DOAP06340 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DOAP06340 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 MTND4P1-201ENST00000457501 1466 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 XIAPP3-201ENST00000312918 795 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 RNU6-1188P-201ENST00000363795 107 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 RNU6-574P-201ENST00000384265 107 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC110754.1-201ENST00000399740 601 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 RPL23AP82-202ENST00000427528 469 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 MIR2053-201ENST00000459295 91 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 CENPBD1P1-201ENST00000464061 469 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC130509.1-201ENST00000464158 433 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC087884.1-201ENST00000469738 328 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 RPS27AP1-201ENST00000475545 471 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 TRBV1-201ENST00000476502 284 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 RPL7P47-201ENST00000497299 556 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 GMPSP1-201ENST00000514075 579 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 RNU6-189P-201ENST00000516120 101 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 SNORA31.22-201ENST00000517204 135 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AP006587.4-201ENST00000526053 529 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 RANP3-201ENST00000530970 276 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC011471.1-201ENST00000585766 187 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC103705.1-201ENST00000619013 241 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DOAP06340 HSPA8P4-201ENST00000511877 1920 ntBASIC3.87□□□□□ -1.79
HLA-DOAP06340 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOAP06340 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 ZNF519P1-201ENST00000449011 1626 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 RNU1-70P-201ENST00000362618 164 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 Y_RNA.197-201ENST00000364004 102 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 Y_RNA.395-201ENST00000383945 109 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 EIF4E2P1-201ENST00000393781 255 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 CISD1P1-201ENST00000393907 327 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 MIR450B-201ENST00000401182 78 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC244098.2-201ENST00000422068 99 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AL590632.1-201ENST00000424289 371 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 MTND3P2-201ENST00000438452 342 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 RPL7L1P1-201ENST00000448259 785 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 RN7SL863P-201ENST00000462370 296 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 RPL27AP5-201ENST00000469428 449 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC117503.1-201ENST00000472241 394 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 VWA8P1-201ENST00000510889 176 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms