Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-506P-201ENST00000516553 94 ntBASIC2.82□□□□□ -1.96
VTNP04004 AC109329.2-201ENST00000519658 482 ntBASIC2.82□□□□□ -1.96
VTNP04004 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.82□□□□□ -1.96
VTNP04004 AP006587.4-201ENST00000526053 529 ntBASIC2.82□□□□□ -1.96
VTNP04004 OR4R1P-201ENST00000529879 463 ntBASIC2.82□□□□□ -1.96
VTNP04004 AC010546.1-201ENST00000569391 485 ntBASIC2.82□□□□□ -1.96
VTNP04004 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.82□□□□□ -1.96
VTNP04004 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.82□□□□□ -1.96
VTNP04004 AC007621.1-201ENST00000604544 437 ntBASIC2.82□□□□□ -1.96
VTNP04004 AC007363.1-201ENST00000604736 620 ntBASIC2.82□□□□□ -1.96
VTNP04004 AL158032.1-201ENST00000605401 106 ntBASIC2.82□□□□□ -1.96
VTNP04004 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VTNP04004 AC103988.1-201ENST00000566382 2177 ntBASIC2.82□□□□□ -1.96
VTNP04004 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.82□□□□□ -1.96
VTNP04004 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VTNP04004 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
VTNP04004 SNORA51.4-201ENST00000364993 124 ntBASIC2.81□□□□□ -1.96
VTNP04004 Y_RNA.381-201ENST00000365666 102 ntBASIC2.81□□□□□ -1.96
VTNP04004 RNU6-946P-201ENST00000383878 107 ntBASIC2.81□□□□□ -1.96
VTNP04004 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
VTNP04004 RNA5SP210-201ENST00000391034 120 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.81□□□□□ -1.96
VTNP04004 AL031779.1-201ENST00000415663 330 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.81□□□□□ -1.96
VTNP04004 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.81□□□□□ -1.96
VTNP04004 ISCA1P1-201ENST00000426679 387 ntBASIC2.81□□□□□ -1.96
VTNP04004 DPPA2P1-201ENST00000428060 556 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.81□□□□□ -1.96
VTNP04004 PIGFP3-201ENST00000441918 722 ntBASIC2.81□□□□□ -1.96
VTNP04004 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTNP04004 AC079781.2-201ENST00000446424 169 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC013267.1-201ENST00000458227 267 ntBASIC2.81□□□□□ -1.96
VTNP04004 RPL37P6-201ENST00000460682 294 ntBASIC2.81□□□□□ -1.96
VTNP04004 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
VTNP04004 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.81□□□□□ -1.96
VTNP04004 RN7SKP24-201ENST00000515888 284 ntBASIC2.81□□□□□ -1.96
VTNP04004 AP003033.1-201ENST00000527244 415 ntBASIC2.81□□□□□ -1.96
VTNP04004 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.81□□□□□ -1.96
VTNP04004 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTNP04004 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VTNP04004 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTNP04004 AL512310.1-201ENST00000548639 172 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.81□□□□□ -1.96
VTNP04004 HMGB1P14-201ENST00000557424 591 ntBASIC2.81□□□□□ -1.96
VTNP04004 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.81□□□□□ -1.96
VTNP04004 EIF1P4-201ENST00000572664 335 ntBASIC2.81□□□□□ -1.96
VTNP04004 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.81□□□□□ -1.96
VTNP04004 AC080078.2-201ENST00000603766 501 ntBASIC2.81□□□□□ -1.96
VTNP04004 AL021997.1-201ENST00000605757 193 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC004492.1-201ENST00000607036 742 ntBASIC2.81□□□□□ -1.96
VTNP04004 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.81□□□□□ -1.96
VTNP04004 AP003122.6-201ENST00000623831 495 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC009161.2-201ENST00000624626 138 ntBASIC2.81□□□□□ -1.96
VTNP04004 AC124864.2-201ENST00000624736 186 ntBASIC2.81□□□□□ -1.96
VTNP04004 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.81□□□□□ -1.96
VTNP04004 AC004944.1-201ENST00000517807 3059 ntBASIC2.81□□□□□ -1.96
VTNP04004 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
VTNP04004 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VTNP04004 Y_RNA.22-201ENST00000362492 102 ntBASIC2.8□□□□□ -1.96
VTNP04004 RNU6-1097P-201ENST00000363586 107 ntBASIC2.8□□□□□ -1.96
VTNP04004 RNU6-960P-201ENST00000364056 120 ntBASIC2.8□□□□□ -1.96
VTNP04004 SMIM11P1-201ENST00000369586 178 ntBASIC2.8□□□□□ -1.96
VTNP04004 MIR518C-201ENST00000384822 101 ntBASIC2.8□□□□□ -1.96
VTNP04004 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VTNP04004 BMS1P22-201ENST00000414726 313 ntBASIC2.8□□□□□ -1.96
VTNP04004 Z85995.1-201ENST00000415547 335 ntBASIC2.8□□□□□ -1.96
VTNP04004 MED13P1-201ENST00000428342 171 ntBASIC2.8□□□□□ -1.96
VTNP04004 MTATP6P16-201ENST00000434543 526 ntBASIC2.8□□□□□ -1.96
VTNP04004 CBWD4P-201ENST00000445695 655 ntBASIC2.8□□□□□ -1.96
VTNP04004 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.8□□□□□ -1.96
VTNP04004 AC010099.1-201ENST00000455434 375 ntBASIC2.8□□□□□ -1.96
VTNP04004 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.8□□□□□ -1.96
VTNP04004 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.8□□□□□ -1.96
VTNP04004 AL031183.1-201ENST00000457667 207 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC093899.1-201ENST00000457984 376 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC104472.2-201ENST00000469035 601 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC128713.1-201ENST00000471495 306 ntBASIC2.8□□□□□ -1.96
VTNP04004 HMGB1P29-201ENST00000505659 499 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC116562.3-201ENST00000506136 177 ntBASIC2.8□□□□□ -1.96
VTNP04004 RN7SKP258-201ENST00000517151 304 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC068587.5-201ENST00000528506 175 ntBASIC2.8□□□□□ -1.96
VTNP04004 AP000867.2-201ENST00000532468 320 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.8□□□□□ -1.96
VTNP04004 AC012119.1-201ENST00000603184 222 ntBASIC2.8□□□□□ -1.96
VTNP04004 AL133393.1-201ENST00000603277 287 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC012507.3-201ENST00000603556 477 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC025449.1-201ENST00000603896 529 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC026585.1-201ENST00000619582 524 ntBASIC2.8□□□□□ -1.96
VTNP04004 AC073534.2-201ENST00000620377 381 ntBASIC2.8□□□□□ -1.96
VTNP04004 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.8□□□□□ -1.96
VTNP04004 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.8□□□□□ -1.96
VTNP04004 MTND5P7-201ENST00000413558 1798 ntBASIC2.79□□□□□ -1.96
VTNP04004 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VTNP04004 MTND4P5-201ENST00000435821 1374 ntBASIC2.79□□□□□ -1.96
VTNP04004 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VTNP04004 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VTNP04004 RNA5SP289-201ENST00000362332 137 ntBASIC2.79□□□□□ -1.96
VTNP04004 RNU6-270P-201ENST00000364131 105 ntBASIC2.79□□□□□ -1.96
VTNP04004 RNU6-108P-201ENST00000365558 107 ntBASIC2.79□□□□□ -1.96
VTNP04004 Y_RNA.372-201ENST00000365599 102 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms