Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-8-201ENST00000365467 107 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM1O00151 SNORA20.2-201ENST00000383922 131 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 RNU1-73P-201ENST00000383971 164 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 U3.26-201ENST00000391236 204 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL360182.1-201ENST00000397433 468 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL138827.1-201ENST00000402666 306 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 RNA5SP21-201ENST00000410917 96 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 NDUFS5P4-201ENST00000412983 318 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC009518.2-201ENST00000418056 731 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM1O00151 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM1O00151 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM1O00151 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL591212.2-201ENST00000433923 257 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 RPS15AP5-201ENST00000436276 388 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM1O00151 AP001486.1-201ENST00000463339 476 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL049873.1-201ENST00000480540 376 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC139453.3-201ENST00000493276 369 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC091965.2-201ENST00000512324 613 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC022634.1-201ENST00000520765 532 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 MTND2P38-201ENST00000522536 667 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.44□□□□□ -2.02
PDLIM1O00151 AP002453.2-201ENST00000533503 320 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AL359212.1-201ENST00000556608 614 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC012414.6-201ENST00000568241 401 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.44□□□□□ -2.02
PDLIM1O00151 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.44□□□□□ -2.02
PDLIM1O00151 SEPT7P9-203ENST00000604116 343 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 Z94722.1-201ENST00000604328 474 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AP002360.4-201ENST00000606980 481 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC091304.9-201ENST00000612091 226 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 AC025594.3-201ENST00000613068 790 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM1O00151 AL512643.1-201ENST00000635735 524 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 MTND5P42-201ENST00000637720 498 ntBASIC2.44□□□□□ -2.02
PDLIM1O00151 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.43□□□□□ -2.02
PDLIM1O00151 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PDLIM1O00151 CKAP2P1-201ENST00000555477 2049 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PDLIM1O00151 FGF7P2-201ENST00000332473 296 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 U8.3-201ENST00000363321 132 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 RNU1-112P-201ENST00000364401 164 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 RNU1-100P-201ENST00000365255 165 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 MIR9-1-201ENST00000385198 89 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PDLIM1O00151 RPS3AP36-201ENST00000398190 775 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 RNU2-49P-201ENST00000410666 184 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM1O00151 AL592148.1-201ENST00000413568 445 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC090960.1-201ENST00000421072 306 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM1O00151 SKA2P1-201ENST00000425592 390 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 ISCA1P6-201ENST00000427740 390 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM1O00151 AC104850.1-201ENST00000435940 476 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.43□□□□□ -2.02
PDLIM1O00151 DPPA3P1-201ENST00000448050 469 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 RPS27AP10-201ENST00000496103 208 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC010486.3-201ENST00000511602 785 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM1O00151 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM1O00151 Y_RNA.689-201ENST00000516589 107 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM1O00151 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM1O00151 MIR3117-201ENST00000584034 78 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC174048.1-201ENST00000603389 144 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 ATP1B3P1-201ENST00000605365 821 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC022893.3-201ENST00000607665 437 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.43□□□□□ -2.02
PDLIM1O00151 AC011939.3-201ENST00000613686 466 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AC130324.3-201ENST00000614165 542 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 AP001506.1-201ENST00000615444 211 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 Z99571.1-201ENST00000636677 394 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 MTND4P35-201ENST00000604257 1375 ntBASIC2.43□□□□□ -2.02
PDLIM1O00151 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM1O00151 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
PDLIM1O00151 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PDLIM1O00151 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.42□□□□□ -2.02
PDLIM1O00151 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PDLIM1O00151 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
PDLIM1O00151 RNU6-778P-201ENST00000363269 103 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RNU4-91P-201ENST00000364778 135 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PDLIM1O00151 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PDLIM1O00151 RNU6-190P-201ENST00000384154 102 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RNU6-39P-201ENST00000384344 107 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RNU6-658P-201ENST00000384606 106 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RNU6-195P-201ENST00000411352 109 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AC023141.4-201ENST00000412031 328 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 RPL26P27-201ENST00000414397 437 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.42□□□□□ -2.02
PDLIM1O00151 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.42□□□□□ -2.02
PDLIM1O00151 BPY2DP-201ENST00000422208 265 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.42□□□□□ -2.02
PDLIM1O00151 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms