Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Gm22240-201ENSMUST00000175225 82 ntBASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1S4R1E0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Gm21814-202ENSMUST00000203277 873 ntBASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1S4R1E0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
H2afb1S4R1E0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb1S4R1E0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb1S4R1E0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
H2afb1S4R1E0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1S4R1E0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1S4R1E0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Mir5122-201ENSMUST00000175004 89 ntBASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms