Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.24■□□□□ 0.83
Hdac6Q9Z2V5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Gm14701-201ENSMUST00000117156 348 ntBASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Gm15358-201ENSMUST00000119249 520 ntBASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Gm17271-201ENSMUST00000165535 355 ntBASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac6Q9Z2V5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac6Q9Z2V5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Gm11025-201ENSMUST00000140773 466 ntBASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Gm17968-201ENSMUST00000194902 784 ntBASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac6Q9Z2V5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Gm8396-201ENSMUST00000057361 823 ntBASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac6Q9Z2V5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms