Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm37179-201ENSMUST00000194862 823 ntBASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cr1Q9Z0D9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Asic1-205ENSMUST00000228185 1818 ntBASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cx3cr1Q9Z0D9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm10602-201ENSMUST00000098239 609 ntBASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Actl10-202ENSMUST00000226583 1501 ntBASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cr1Q9Z0D9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cr1Q9Z0D9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms