Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Gm8344-201ENSMUST00000119813 856 ntBASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Gm6089-201ENSMUST00000197666 938 ntBASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn8aQ9WTU3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn8aQ9WTU3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm15173-201ENSMUST00000122049 433 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 AW822252-206ENSMUST00000208904 237 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm13418-201ENSMUST00000119097 944 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn8aQ9WTU3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms