Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Mir5122-201ENSMUST00000175004 89 ntBASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd2Q9R1A8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Gm21814-202ENSMUST00000203277 873 ntBASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd2Q9R1A8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Rfwd2Q9R1A8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfwd2Q9R1A8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfwd2Q9R1A8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Gm27000-201ENSMUST00000182943 842 ntBASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd2Q9R1A8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd2Q9R1A8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms