Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Gm5244-202ENSMUST00000189517 743 ntBASIC14.19□□□□□ -0.14
Nubp1Q9R060 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.19□□□□□ -0.14
Nubp1Q9R060 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm12260-201ENSMUST00000122447 411 ntBASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Auts2-212ENSMUST00000178555 309 ntBASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm44450-201ENSMUST00000199528 114 ntBASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm44430-201ENSMUST00000203376 995 ntBASIC14.18□□□□□ -0.14
Nubp1Q9R060 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.18□□□□□ -0.14
Nubp1Q9R060 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.18□□□□□ -0.14
Nubp1Q9R060 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp1Q9R060 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Phf7-203ENSMUST00000226565 1971 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm25990-201ENSMUST00000102440 86 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm14494-201ENSMUST00000118786 435 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm14140-201ENSMUST00000119999 995 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm9727-201ENSMUST00000161387 555 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm4535-201ENSMUST00000182274 558 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 CT009754.4-201ENSMUST00000221430 565 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 AV026068-213ENSMUST00000223675 1171 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Gm10355-201ENSMUST00000097146 517 ntBASIC14.17□□□□□ -0.14
Nubp1Q9R060 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp1Q9R060 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.16□□□□□ -0.14
Nubp1Q9R060 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.16□□□□□ -0.14
Nubp1Q9R060 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp1Q9R060 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.16□□□□□ -0.14
Nubp1Q9R060 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.16□□□□□ -0.14
Nubp1Q9R060 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms