Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzd4Q9QY39 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Pdzd4Q9QY39 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzd4Q9QY39 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Gm27357-201ENSMUST00000183754 135 ntBASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzd4Q9QY39 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pdzd4Q9QY39 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Gm17971-201ENSMUST00000190239 806 ntBASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzd4Q9QY39 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms