Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm4Q9QXA5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lsm4Q9QXA5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm4Q9QXA5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.82□□□□□ -0.36
Lsm4Q9QXA5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm4Q9QXA5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm4Q9QXA5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm4Q9QXA5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Gm18115-201ENSMUST00000221209 621 ntBASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm4Q9QXA5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Phf7-203ENSMUST00000226565 1971 ntBASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm4Q9QXA5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms