Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn5aQ9JJV9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Gm17968-201ENSMUST00000194902 784 ntBASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn5aQ9JJV9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn5aQ9JJV9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn5aQ9JJV9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Gm26308-201ENSMUST00000157768 69 ntBASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Gm18622-201ENSMUST00000219361 595 ntBASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Grk6-207ENSMUST00000225925 2769 ntBASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn5aQ9JJV9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Gm37153-201ENSMUST00000193637 231 ntBASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn5aQ9JJV9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn5aQ9JJV9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms