Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herpud1Q9JJK5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gm37055-201ENSMUST00000191866 133 ntBASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gm44450-201ENSMUST00000199528 114 ntBASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Herpud1Q9JJK5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herpud1Q9JJK5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms