Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Gm27494-201ENSMUST00000184735 189 ntBASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Auts2-212ENSMUST00000178555 309 ntBASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1fQ9JIS7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Gm18246-201ENSMUST00000221023 728 ntBASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1fQ9JIS7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cacna1fQ9JIS7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Gm15427-201ENSMUST00000117288 531 ntBASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Gm5312-201ENSMUST00000203728 547 ntBASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Gm19164-201ENSMUST00000210667 640 ntBASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.28■□□□□ 0.52
Cacna1fQ9JIS7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1fQ9JIS7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms