Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Gm15165-201ENSMUST00000118140 502 ntBASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ripk4Q9ERK0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ripk4Q9ERK0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ripk4Q9ERK0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Gm27867-201ENSMUST00000184778 125 ntBASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ripk4Q9ERK0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ripk4Q9ERK0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ripk4Q9ERK0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ripk4Q9ERK0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ripk4Q9ERK0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.66■□□□□ 0.74
Ripk4Q9ERK0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ripk4Q9ERK0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms