Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtp4Q9ER80 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Gm7153-201ENSMUST00000117092 455 ntBASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtp4Q9ER80 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rtp4Q9ER80 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtp4Q9ER80 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtp4Q9ER80 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtp4Q9ER80 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms