Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nkx2-4Q9EQM3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Gm5312-201ENSMUST00000203728 547 ntBASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx2-4Q9EQM3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Gm36967-201ENSMUST00000193814 266 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Gm44335-201ENSMUST00000196879 141 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Gm44297-201ENSMUST00000198304 141 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Gm44346-201ENSMUST00000198851 141 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-4Q9EQM3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Gm5745-201ENSMUST00000183748 313 ntBASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-4Q9EQM3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms