Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upf1Q9EPU0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Gm12859-201ENSMUST00000117834 427 ntBASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Gm15487-201ENSMUST00000122373 465 ntBASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.34■□□□□ 0.53
Upf1Q9EPU0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upf1Q9EPU0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Upf1Q9EPU0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Gm15824-201ENSMUST00000119516 955 ntBASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upf1Q9EPU0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upf1Q9EPU0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Gm23984-201ENSMUST00000157139 203 ntBASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Gm6266-201ENSMUST00000203844 806 ntBASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
Upf1Q9EPU0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms