Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ap3s1Q9DCR2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ap3s1Q9DCR2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ap3s1Q9DCR2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm6211-202ENSMUST00000167849 925 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm5075-201ENSMUST00000196916 622 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm4974-201ENSMUST00000209974 875 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ap3s1Q9DCR2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Ap3s1Q9DCR2 Gm17661-201ENSMUST00000170317 270 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms