Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.32■□□□□ 0.36
Gtf3c6Q9D8P7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Gm9013-201ENSMUST00000132939 882 ntBASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gtf3c6Q9D8P7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gtf3c6Q9D8P7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf3c6Q9D8P7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms