Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh2d4aQ9D7V1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Gm7791-201ENSMUST00000219066 539 ntBASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sh2d4aQ9D7V1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh2d4aQ9D7V1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh2d4aQ9D7V1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Sh2d4aQ9D7V1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh2d4aQ9D7V1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh2d4aQ9D7V1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Mir1199-201ENSMUST00000117015 119 ntBASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh2d4aQ9D7V1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms