Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chmp5Q9D7S9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp5Q9D7S9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Gm18115-201ENSMUST00000221209 621 ntBASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp5Q9D7S9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp5Q9D7S9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp5Q9D7S9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Chmp5Q9D7S9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp5Q9D7S9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp5Q9D7S9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Gm715-201ENSMUST00000117865 831 ntBASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Gm44450-201ENSMUST00000199528 114 ntBASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp5Q9D7S9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp5Q9D7S9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms