Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.79■□□□□ 0.44
Cfap53Q9D439 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.79■□□□□ 0.44
Cfap53Q9D439 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.79■□□□□ 0.44
Cfap53Q9D439 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cfap53Q9D439 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.78■□□□□ 0.44
Cfap53Q9D439 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.78■□□□□ 0.44
Cfap53Q9D439 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.78■□□□□ 0.44
Cfap53Q9D439 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.78■□□□□ 0.44
Cfap53Q9D439 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.78■□□□□ 0.44
Cfap53Q9D439 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.78■□□□□ 0.44
Cfap53Q9D439 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cfap53Q9D439 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.77■□□□□ 0.44
Cfap53Q9D439 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.77■□□□□ 0.44
Cfap53Q9D439 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cfap53Q9D439 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cfap53Q9D439 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Cfap53Q9D439 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.77■□□□□ 0.43
Cfap53Q9D439 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cfap53Q9D439 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cfap53Q9D439 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
Cfap53Q9D439 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms