Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snx29Q9D3S3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Gm24513-201ENSMUST00000174964 138 ntBASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Gm43575-201ENSMUST00000196420 516 ntBASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snx29Q9D3S3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx29Q9D3S3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gm5682-201ENSMUST00000173402 505 ntBASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gm27397-201ENSMUST00000184997 107 ntBASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx29Q9D3S3 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx29Q9D3S3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Mir8117-201ENSMUST00000184773 107 ntBASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx29Q9D3S3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Snx29Q9D3S3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Snx29Q9D3S3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx29Q9D3S3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx29Q9D3S3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx29Q9D3S3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Snx29Q9D3S3 Gm23935-201ENSMUST00000102303 57 ntBASIC17.7■□□□□ 0.42
Snx29Q9D3S3 Gm24270-201ENSMUST00000102326 57 ntBASIC17.7■□□□□ 0.42
Snx29Q9D3S3 Gm4995-201ENSMUST00000117247 432 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms