Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.26■□□□□ 0.67
Stag1Q9D3E6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag1Q9D3E6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Stag1Q9D3E6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Gm15173-201ENSMUST00000122049 433 ntBASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Gm11780-201ENSMUST00000136880 516 ntBASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Gm6089-201ENSMUST00000197666 938 ntBASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag1Q9D3E6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Gm5364-201ENSMUST00000216789 889 ntBASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Stag1Q9D3E6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.22■□□□□ 0.67
Stag1Q9D3E6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Stag1Q9D3E6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.21■□□□□ 0.67
Stag1Q9D3E6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms