Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps28Q9D1C8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps28Q9D1C8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps28Q9D1C8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps28Q9D1C8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps28Q9D1C8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps28Q9D1C8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps28Q9D1C8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps28Q9D1C8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps28Q9D1C8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps28Q9D1C8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps28Q9D1C8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps28Q9D1C8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms