Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Sybu-209ENSMUST00000228639 4113 ntBASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkiras2Q9CR56 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Il3ra-202ENSMUST00000223589 738 ntBASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkiras2Q9CR56 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Gm30025-201ENSMUST00000218555 728 ntBASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkiras2Q9CR56 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Mir6982-201ENSMUST00000184354 68 ntBASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkiras2Q9CR56 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkiras2Q9CR56 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkiras2Q9CR56 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkiras2Q9CR56 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms