Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.34■□□□□ 0.21
Lsm7Q9CQQ8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm7Q9CQQ8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.33■□□□□ 0.21
Lsm7Q9CQQ8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm7Q9CQQ8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm7Q9CQQ8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Gm25745-201ENSMUST00000174945 133 ntBASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm7Q9CQQ8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Gm11452-201ENSMUST00000122376 690 ntBASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Rps4l-201ENSMUST00000071745 943 ntBASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm7Q9CQQ8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lsm7Q9CQQ8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm7Q9CQQ8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms