Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTRAFQ9CQE8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Gm10493-201ENSMUST00000097270 612 ntBASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RTRAFQ9CQE8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTRAFQ9CQE8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 Gm18671-201ENSMUST00000214826 683 ntBASIC13.21□□□□□ -0.29
RTRAFQ9CQE8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms