Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Gm13223-201ENSMUST00000118609 747 ntBASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Gm43767-201ENSMUST00000198933 381 ntBASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh15Q99PJ1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh15Q99PJ1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh15Q99PJ1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Gm22175-201ENSMUST00000175007 78 ntBASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Gm5866-201ENSMUST00000177881 973 ntBASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Gm38294-201ENSMUST00000192831 381 ntBASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.27■□□□□ 0.51
Pcdh15Q99PJ1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Gm12008-201ENSMUST00000117791 755 ntBASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh15Q99PJ1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh15Q99PJ1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Gm6257-201ENSMUST00000163864 910 ntBASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh15Q99PJ1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms