Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh23Q99PF4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh23Q99PF4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.41■□□□□ 0.22
Cdh23Q99PF4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh23Q99PF4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Gm27306-201ENSMUST00000183970 107 ntBASIC16.4■□□□□ 0.22
Cdh23Q99PF4 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.4■□□□□ 0.22
Cdh23Q99PF4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh23Q99PF4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Gm6912-201ENSMUST00000117218 544 ntBASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms