Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac9Q99N13 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac9Q99N13 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.03■□□□□ 0.64
Hdac9Q99N13 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
Hdac9Q99N13 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac9Q99N13 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Gm4995-201ENSMUST00000117247 432 ntBASIC19.02■□□□□ 0.64
Hdac9Q99N13 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Gm18622-201ENSMUST00000219361 595 ntBASIC19.02■□□□□ 0.64
Hdac9Q99N13 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac9Q99N13 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac9Q99N13 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac9Q99N13 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.01■□□□□ 0.63
Hdac9Q99N13 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.01■□□□□ 0.63
Hdac9Q99N13 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac9Q99N13 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hdac9Q99N13 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19■□□□□ 0.63
Hdac9Q99N13 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19■□□□□ 0.63
Hdac9Q99N13 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hdac9Q99N13 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Hdac9Q99N13 Gm11764-201ENSMUST00000120221 623 ntBASIC19■□□□□ 0.63
Hdac9Q99N13 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19■□□□□ 0.63
Hdac9Q99N13 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19■□□□□ 0.63
Hdac9Q99N13 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19■□□□□ 0.63
Hdac9Q99N13 AC159106.1-201ENSMUST00000224421 690 ntBASIC19■□□□□ 0.63
Hdac9Q99N13 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
Hdac9Q99N13 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac9Q99N13 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm8825-201ENSMUST00000182565 998 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm4518-201ENSMUST00000182638 718 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.99■□□□□ 0.63
Hdac9Q99N13 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac9Q99N13 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hdac9Q99N13 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hdac9Q99N13 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac9Q99N13 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac9Q99N13 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms