Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf111Q99ML9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gm18959-201ENSMUST00000208954 655 ntBASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf111Q99ML9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Mir5130-201ENSMUST00000175160 84 ntBASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf111Q99ML9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Gm6433-201ENSMUST00000118634 875 ntBASIC15.71■□□□□ 0.11
Rnf111Q99ML9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf111Q99ML9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf111Q99ML9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf111Q99ML9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf111Q99ML9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf111Q99ML9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf111Q99ML9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms