Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm10052-201ENSMUST00000168019 960 ntBASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm28033-201ENSMUST00000184224 96 ntBASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm18669-201ENSMUST00000216049 778 ntBASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm7729-201ENSMUST00000050143 801 ntBASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr3Q99MB1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tlr3Q99MB1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tlr3Q99MB1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Gm44430-201ENSMUST00000203376 995 ntBASIC17.39■□□□□ 0.37
Tlr3Q99MB1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr3Q99MB1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Gm7153-201ENSMUST00000117092 455 ntBASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Gm11950-201ENSMUST00000121615 838 ntBASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Tlr3Q99MB1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tlr3Q99MB1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms