Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RtcbQ99LF4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.94■□□□□ 0.78
RtcbQ99LF4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.94■□□□□ 0.78
RtcbQ99LF4 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.94■□□□□ 0.78
RtcbQ99LF4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RtcbQ99LF4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Mir6956-201ENSMUST00000183598 62 ntBASIC19.93■□□□□ 0.78
RtcbQ99LF4 Gm44492-201ENSMUST00000197012 141 ntBASIC19.93■□□□□ 0.78
RtcbQ99LF4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RtcbQ99LF4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Gm8344-201ENSMUST00000119813 856 ntBASIC19.92■□□□□ 0.78
RtcbQ99LF4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.92■□□□□ 0.78
RtcbQ99LF4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.92■□□□□ 0.78
RtcbQ99LF4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RtcbQ99LF4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.92■□□□□ 0.78
RtcbQ99LF4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RtcbQ99LF4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms