Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gm27459-201ENSMUST00000184860 107 ntBASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lysmd3Q99LE3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Gm7461-201ENSMUST00000058918 827 ntBASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lysmd3Q99LE3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lysmd3Q99LE3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Lysmd3Q99LE3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd3Q99LE3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd3Q99LE3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms