Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm25911-201ENSMUST00000157621 56 ntBASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cstf1Q99LC2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Gm15920-201ENSMUST00000118998 402 ntBASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cstf1Q99LC2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cstf1Q99LC2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cstf1Q99LC2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cstf1Q99LC2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Gm7222-201ENSMUST00000117512 906 ntBASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Gm11780-201ENSMUST00000136880 516 ntBASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.14■□□□□ 0.17
Cstf1Q99LC2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Mir3113-201ENSMUST00000175478 76 ntBASIC16.13■□□□□ 0.17
Cstf1Q99LC2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cstf1Q99LC2 Gm10175-201ENSMUST00000086013 645 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms