Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc4Q99J62 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc4Q99J62 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc4Q99J62 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rfc4Q99J62 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc4Q99J62 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc4Q99J62 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.64■□□□□ 0.57
Rfc4Q99J62 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc4Q99J62 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Gm14822-201ENSMUST00000122247 291 ntBASIC18.63■□□□□ 0.57
Rfc4Q99J62 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc4Q99J62 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Gm4995-201ENSMUST00000117247 432 ntBASIC18.62■□□□□ 0.57
Rfc4Q99J62 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.62■□□□□ 0.57
Rfc4Q99J62 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc4Q99J62 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc4Q99J62 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.61■□□□□ 0.57
Rfc4Q99J62 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Gm25406-201ENSMUST00000157599 105 ntBASIC18.61■□□□□ 0.57
Rfc4Q99J62 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc4Q99J62 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.6■□□□□ 0.57
Rfc4Q99J62 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.6■□□□□ 0.57
Rfc4Q99J62 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc4Q99J62 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Gm36967-201ENSMUST00000193814 266 ntBASIC18.59■□□□□ 0.57
Rfc4Q99J62 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.59■□□□□ 0.57
Rfc4Q99J62 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rfc4Q99J62 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms