Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.09■□□□□ 0.65
Col20a1Q923P0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col20a1Q923P0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 AW822252-206ENSMUST00000208904 237 ntBASIC19.08■□□□□ 0.65
Col20a1Q923P0 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.08■□□□□ 0.65
Col20a1Q923P0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col20a1Q923P0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col20a1Q923P0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.08■□□□□ 0.64
Col20a1Q923P0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.08■□□□□ 0.64
Col20a1Q923P0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Col20a1Q923P0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.07■□□□□ 0.64
Col20a1Q923P0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col20a1Q923P0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col20a1Q923P0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.05■□□□□ 0.64
Col20a1Q923P0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.05■□□□□ 0.64
Col20a1Q923P0 Gm11780-201ENSMUST00000136880 516 ntBASIC19.05■□□□□ 0.64
Col20a1Q923P0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.05■□□□□ 0.64
Col20a1Q923P0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col20a1Q923P0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms