Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc1bQ920F6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.64■□□□□ 0.58
Smc1bQ920F6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc1bQ920F6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc1bQ920F6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Smc1bQ920F6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.64■□□□□ 0.57
Smc1bQ920F6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Rprl3-201ENSMUST00000157400 290 ntBASIC18.64■□□□□ 0.57
Smc1bQ920F6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc1bQ920F6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc1bQ920F6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.62■□□□□ 0.57
Smc1bQ920F6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.62■□□□□ 0.57
Smc1bQ920F6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc1bQ920F6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gm13216-201ENSMUST00000117145 591 ntBASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gm12350-201ENSMUST00000121208 462 ntBASIC18.61■□□□□ 0.57
Smc1bQ920F6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gm5364-201ENSMUST00000216789 889 ntBASIC18.61■□□□□ 0.57
Smc1bQ920F6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc1bQ920F6 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.6■□□□□ 0.57
Smc1bQ920F6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc1bQ920F6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms