Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.96■□□□□ 0.3
Pcdha3Q91Y16 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha3Q91Y16 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdha3Q91Y16 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha3Q91Y16 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha3Q91Y16 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms