Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb20Q91XZ9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb20Q91XZ9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb20Q91XZ9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms