Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Gm17808-201ENSMUST00000200859 894 ntBASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb6Q91XZ4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 AA414768-201ENSMUST00000121924 1257 ntBASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb6Q91XZ4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb6Q91XZ4 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Gm45328-201ENSMUST00000210942 917 ntBASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb6Q91XZ4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms