Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgb2Q91XX7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhgb2Q91XX7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Gm13186-201ENSMUST00000118031 316 ntBASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhgb2Q91XX7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Asic1-205ENSMUST00000228185 1818 ntBASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pcdhgb2Q91XX7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb2Q91XX7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb2Q91XX7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb2Q91XX7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb2Q91XX7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb2Q91XX7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb2Q91XX7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms